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Che-Chun Chen Assistant Professor

Che-Chun Chen Assistant Professor
Education：Ph.D. Degree Program in Marine Biotechnology, National Taiwan Ocean University & Academia Sinica., R.O.C.
Field of Specialization：Aquaculture, Genomics, Metabolomics, Marine Biotechnology
LAB: Life Science Building Room / Ecogenomics and Environmental Networks Laboratory
Tel: +886-2-2462-2192 ext

E-mail：zenchen@mail.ntou.edu.tw

Website：https://sites.google.com/view/zen-lab

Refereed Papers

 

  1. Chen, C.-C., Hsu, T.-H., Lu, H.-Y., Tang, S.-L., Ho, Y.-N., 2025. High-quality chromosome level genome of three Meretrix species using Nanopore and Hi-C technologies. Scientific data, 12(1), 1141.
  2. Chen, C.-C., Chen, Y.-P., Yang, H.-T., Chen, Y.-L., Wu, C.-W., Gong, H.-Y., Ho, Y.-S., Ho, Y.-N., 2025. Temperature-dependent shifts in gut microbiota and metabolome of olive flounder (Paralichthys olivaceus): implications for coldwater aquaculture expansion and probiotic applications. Animal Microbiome, 7(1), 49
  3. Han, N., Yang, C., Ho, Y.-N., Moriuchi, R., Chen, C.-C., Inoue, C., & Chien, M.-F., 2024. Complete genome sequence of Pseudomonas moorei strain m318 isolated from rhizosphere of Pteris multifida in high-arsenic-content soil. Microbiology Resource Announcement,13(12), e00774-24.
  4. Chen, C.-C., Lin, W.-H., Hsu, T.-H., Ho, Y.-N., 2024. Complete genome sequence of a potential new species Vibrio sp. NTOU-M3 isolated from hard clam, Meretrix taiwanica, in Taiwan. Microbiology Resource Announcement, 13(11), e00810-24.
  5. Chen, C.-C., Lin, C.-Y., Lu, H.-Y., Liou, C.-H., Ho, Y.-N., Huang, C.-W., Zhang, Z.-F., Kao, C.-H., Yang, W.-C., Gong, H.-Y., 2024. Transcriptomics and gut microbiome analysis of the edible herb Bidens pilosa as a functional feed additive to promote growth and metabolism in tilapia (Oreochromis spp.). BMC genomics, 25(1), 785.
  6. Yang, Y.-C., Chu, P.-Y., Chen, C.-C., Yang, W.-C., Hsu, T.-H., Gong, H.-Y., Liao, I.-C., Huang, C.-W., 2024. Transcriptomic Insights and the Development of Microsatellite Markers to Assess Genetic Diversity in the Broodstock Management of Litopenaeus stylirostris. Animals, 14(11), 1685.
  7. Chen, C.-C., Huang, C.-W., Lin, C.-Y., Ho, C.-H., Hsu, T.-H., Lin, T.-T., Chen, R.-H., Pham, H., Chang, C.-I., Gong, H.-Y., 2022. Development of Disease-Resistance-Associated Microsatellite DNA Markers for Selective Breeding of Tilapia (Oreochromis spp.) Farmed in Taiwan. Genes, 13(1), 99.
  8. Shikina, S., Chen, C.-C. (Co-First Author), Chiu, Y.-L., Tsai, P.-H., Chang, C.-F., 2020. Apoptosis in gonadal somatic cells of scleractinian corals: implications of structural adjustments for gamete production and release. Proceedings of the Royal Society B: Biological Sciences, 287(1930), 20200578.  
  9. Shikina, S., Chiu, Y.-L., Chen, C.-J., Yang, S.-H., Yao, J.I.C., Chen, C.-C., Wei, J.-D., Shao, Z.-F., Chang, C.-F., 2017. Immunodetection of acetylated alpha-tubulin in stony corals: Evidence for the existence of flagella in coral male germ cells. Molecular Reproduction and Development, 84(12), 1285-1295.

Others publication

  1. 陳澤君、何攖寧。 2026。基因解碼釐清百年文蛤分類謎團。海洋高雄期刊。高雄：高雄市政府海洋局。62(1):44-47.
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